Write samples to FCS files in new folder or save GatingSet
cyto_save(x, ...) # S3 method for GatingSet cyto_save( x, parent = NULL, split = FALSE, names = NULL, save_as = NULL, inverse = FALSE, trans = NULL, ... ) # S3 method for GatingHierarchy cyto_save( x, parent = NULL, split = FALSE, names = NULL, save_as = NULL, inverse = FALSE, trans = NULL, ... ) # S3 method for flowSet cyto_save( x, split = FALSE, names = NULL, save_as = NULL, inverse = FALSE, trans = NULL, ... ) # S3 method for flowFrame cyto_save( x, split = FALSE, names = NULL, save_as = NULL, inverse = FALSE, trans = NULL, ... )
x | object of class |
---|---|
... | not in use. |
parent | name of the parent population to extract when a
|
split | logical indicating whether samples merged using
|
names | original names of the samples prior to merging using
|
save_as | name of the folder to which the written FCS files should be
saved, set to NULL by default to save the files to the current working
directory. To prevent files being overwritten, it is recommended that
|
inverse | logical indicating whether the data should be
inverse transformed prior to writing FCS files, set to FALSE by default.
Inverse transformations of |
trans | object of class |
list of flowFrames containing the data that was saved to the FCS files.
Dillon Hammill, Dillon.Hammill@anu.edu.au
if (FALSE) { # Load in CytoExploreRData to access data library(CytoExploreRData) # Activation flowSet fs <- Activation # Save each flowFrame to file cyto_save(fs, save_as = "Samples") }