Assign marker names to flowFrame or flowSet

cyto_markers_edit opens an editable table containing a list of channels and markers for a flowFrame, flowSet, GatingSet or GatingSet. Users can edit the name or desc columns with updated channel names or marker names respectively. These entries will be updated in the x upon closing the window and saved to a "Experiment-markers.csv" file for future use.

cyto_markers_edit(x, file = NULL, ...)

Arguments

x	object of class flowFrame, flowSet, GatingSet or GatingSet.
file	name of csv file containing columns 'channel' and 'marker'.
...	additional arguments passed to data_editor.

Value

save inputs to "Experiment-Markers.csv" and returns updated samples.

Author

Dillon Hammill, Dillon.Hammill@anu.edu.au

Examples

if (FALSE) {
# Load in CytoExploreRData to access data
library(CytoExploreRData)

# Load in samples
fs <- Activation

# Add marker names to channels - edit table
fs <- cyto_markers_edit(fs)
}