Apply a function over cytometry objects

Apply a function over cytometry objects

cyto_apply(x, FUN, ..., simplify = TRUE, use.exprs = FALSE)

Arguments

x	object of class flowSet or cytoset.
FUN	function to apply to each flowFrame or cytoframe in the supplied flowSet or cytoset.
...	optional arguments to FUN.
simplify	logical indicating whether the resulting list should be simplified into a flowSet or bound into a matrix or data.frame using rbind, set to TRUE by default.
use.exprs	logical indicating whether the function should be applied to the raw data in each flowFrame, set to FALSE by default.

See also

fsApply

Author

Dillon Hammill, Dillon.Hammill@anu.edu.au

Examples

library(CytoExploreRData)

# Activation dataset
fs <- Activation

# Sample each flowFrame
fs <- cyto_apply(fs, cyto_sample)