Manually draw gates around populations for analysis of flow cytometry data.
gate_draw(x, ...)
| x | |
|---|---|
| ... | additional method-specific arguments. |
gate_draw is a convenient wrapper for the gating functions shipped
with cytoRSuite to facilitate analysis of flow cytometry by gate
drawing. Using gate_draw users can specify the type of gate(s) to be
constructed through the type argument and gate_draw will
automatically handle plotting the data and make calls to the relevant gating
function(s) to construct the gates around populations of interest.
gate_draw has methods for
flowFrame,
flowSet and
GatingSet objects, refer to
their respective help pages for more information. The flowFrame and flowSet
methods simply return the constructed gates as a list of
filters, whilst the GatingSet method
automatically applies the constructed gates to the GatingSet and saves the
constructed gates in an openCyto
gatingTemplatefor future use.
See gate_edit and gate_remove to manipulate
constructed gates and modify their entries in the gatingTemplate.