Assign marker names to flowFrame or flowSet

Source: R/helper-functions.R

cyto_markers opens an editable table containing a list of channels and markers for a flowFrame or flowSet. Users can edit the name or desc columns with updated channel names or marker names respectively. These entries will be updated in the flowFrame or flowSet upon closing the window and saved to a "Experiment-markers.csv" file for future use.

cyto_markers(x, file = NULL)

Arguments

x

object of class flowFrame or flowSet.
file

name of csv file containing columns 'Channel' and 'Marker'.

Value

NULL and update marker names of x.

Examples

# NOT RUN {
library(CytoRSuiteData)

# Load in samples
fs <- Activation

# Add marker names to channels - edit table
cyto_markers(fs)
# }